STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62487.1PFAM: Domain of unknown function DUF305; KEGG: syf:Synpcc7942_B2645 hypothetical protein. (232 aa)    
Predicted Functional Partners:
EHA62485.1
KEGG: pmg:P9301_12851 fumarate reductase subunit D.
       0.671
EHA62486.1
Hypothetical protein; KEGG: pmm:PMM1421 gibberellin regulated protein.
       0.671
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.645
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.644
EHA62488.1
KEGG: cyj:Cyan7822_2469 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; Transcription regulator MerR, DNA binding; SMART: HTH transcriptional regulator, MerR.
 
     0.640
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.611
EHA63027.1
Helicase domain protein; PFAM: Helicase, C-terminal; KEGG: pmf:P9303_08571 helicase domain-containing protein.
  
     0.570
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.532
EHA61818.1
PFAM: Protein of unknown function DUF456; KEGG: pmt:PMT2047 hypothetical protein.
  
     0.524
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.519
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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