STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62496.1ABC-type transporter, periplasmic subunit family 3; KEGG: pmt:PMT0515 GIC family ligand gated channel; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3. (396 aa)    
Predicted Functional Partners:
EHA61918.1
CheW protein; KEGG: dak:DaAHT2_2535 response regulator receiver modulated CheW protein; PFAM: CheW-like protein; SMART: CheW-like protein.
   
 0.887
EHA64255.1
PFAM: Carbohydrate-selective porin OprB; KEGG: pmf:P9303_19511 hypothetical protein; Belongs to the OprB family.
  
     0.678
EHA61970.1
KEGG: pmf:P9303_08401 hypothetical protein.
  
 
 0.678
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
  
     0.655
EHA62251.1
KEGG: pmf:P9303_24661 hypothetical protein.
  
 
   0.649
EHA62204.1
KEGG: pmf:P9303_07051 hypothetical protein.
  
     0.645
EHA60233.1
Integral membrane sensor signal transduction histidine kinase; KEGG: ana:alr4878 two-component hybrid sensor and regulator; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain.
   
 0.634
EHA63227.1
KEGG: pmf:P9303_12111 ABC transporter for amino acids, membrane component; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; PFAM: Binding-protein-dependent transport systems inner membrane component.
  
 0.630
EHA62435.1
KEGG: cyc:PCC7424_1391 heat domain containing protein.
  
     0.627
EHA63131.1
KEGG: syf:Synpcc7942_0114 hypothetical protein.
  
     0.621
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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