Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
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Co-expression
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[Homology]
Score
EHA62511.1PFAM: HTH transcriptional regulator, GntR; KEGG: pmf:P9303_01531 putative transcriptional regulator. (286 aa)    
Predicted Functional Partners:
EHA60623.1
KEGG: pmf:P9303_02201 hypothetical protein.
  
     0.774
EHA63183.1
KEGG: npu:Npun_F3905 hypothetical protein.
  
     0.773
EHA63636.1
KEGG: pmj:P9211_10191 hypothetical protein.
  
     0.771
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
     0.771
EHA64224.1
KEGG: pmf:P9303_07371 single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding.
  
     0.770
EHA63004.1
PFAM: Ferredoxin; KEGG: pmt:PMT1184 hypothetical protein.
  
     0.769
EHA64384.1
KEGG: pmf:P9303_05641 hypothetical protein.
  
     0.769
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.764
EHA60205.1
KEGG: pmf:P9303_21381 hypothetical protein.
  
     0.764
EHA64249.1
KEGG: pmf:P9303_07011 hypothetical protein.
  
     0.763
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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