STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62522.1PFAM: Sulfotransferase domain; KEGG: pmf:P9303_01341 hypothetical protein. (276 aa)    
Predicted Functional Partners:
EHA63430.1
KEGG: pmf:P9303_15251 heat shock protein 90; PFAM: ATPase-like, ATP-binding domain; Heat shock protein Hsp90, C-terminal; SMART: ATPase-like, ATP-binding domain.
   
 0.853
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.790
EHA62521.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_01331 hypothetical protein.
   
   0.788
EHA60417.1
KEGG: pmf:P9303_04671 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII; Belongs to the P(II) protein family.
    
 
 0.777
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 0.767
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
    
  0.766
EHA63938.1
PFAM: Glycosyl transferase, family 2; KEGG: pmt:PMT0543 glycosyl transferase family protein.
    
 0.764
EHA60222.1
KEGG: cyn:Cyan7425_3398 cellulose synthase (UDP-forming); PFAM: Glycosyl transferase, family 2.
    
 0.764
EHA60223.1
KEGG: syf:Synpcc7942_0466 cellulose synthase (UDP-forming).
    
 0.764
EHA60224.1
Hypothetical protein; KEGG: amr:AM1_4956 glycosyl transferase, group 2 family protein.
    
 0.764
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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