STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62523.1KEGG: pmt:PMT0078 hypothetical protein. (248 aa)    
Predicted Functional Partners:
EHA62524.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; SMART: ATPase, AAA+ type, core; Cyclic nucleotide-binding domain; TIGRFAM: ATPase, type I secretion system, HlyB; KEGG: pmt:PMT0077 multidrug ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-binding domain.
 
   
 0.936
EHA62525.1
PFAM: Secretion protein HlyD; KEGG: pmf:P9303_00851 transporter component.
 
     0.844
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
 
     0.781
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.759
EHA60549.1
KEGG: pmf:P9303_03171 hypothetical protein.
  
     0.746
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.731
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
  
   
 0.729
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
  
     0.727
EHA63712.1
KEGG: pmt:PMT0493 hypothetical protein.
  
     0.720
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.716
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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