STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62526.1PFAM: Hemolysin-type calcium-binding repeat; KEGG: cyc:PCC7424_1242 hemolysin-type calcium-binding region. (411 aa)    
Predicted Functional Partners:
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
   
 0.821
EHA62524.1
Cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporter; SMART: ATPase, AAA+ type, core; Cyclic nucleotide-binding domain; TIGRFAM: ATPase, type I secretion system, HlyB; KEGG: pmt:PMT0077 multidrug ABC transporter; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; Cyclic nucleotide-binding domain.
 
 
 0.802
EHA62255.1
TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; KEGG: pmf:P9303_24701 molybdenum cofactor biosynthesis protein; SMART: Molybdopterin binding.
  
  
 0.695
EHA62525.1
PFAM: Secretion protein HlyD; KEGG: pmf:P9303_00851 transporter component.
  
 
 0.652
EHA62523.1
KEGG: pmt:PMT0078 hypothetical protein.
 
   
 0.647
EHA60092.1
Superoxide dismutase, Ni; KEGG: pma:Pro1368 putative nickel-containing superoxide dismutase precursor (NISOD); TIGRFAM: Superoxide dismutase, Nickel-type; PFAM: Superoxide dismutase, Nickel-type.
  
  
  0.625
EHA62216.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; Peptidase C39, bacteriocin processing; ABC transporter, transmembrane domain; KEGG: pmt:PMT0978 multidrug ABC transporter; SMART: ATPase, AAA+ type, core; overlaps another CDS with the same product name.
  
 
 0.550
gatC
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family.
    
  0.541
EHA62217.1
Xenobiotic-transporting ATPase; PFAM: ABC transporter-like; ABC transporter, transmembrane domain; KEGG: pmt:PMT0977 multidrug ABC transporter; SMART: ATPase, AAA+ type, core; overlaps another CDS with the same product name.
  
 
 0.536
EHA63993.1
KEGG: pmf:P9303_17751 hypothetical protein.
  
     0.517
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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