STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61824.1KEGG: pmf:P9303_27311 hypothetical protein. (92 aa)    
Predicted Functional Partners:
EHA61823.1
Hypothetical protein.
       0.773
EHA61825.1
o-succinylbenzoate--CoA ligase; KEGG: pmf:P9303_27321 putative O-succinylbenzoic acid--CoA ligase (OSB-CoA synthetase); PFAM: AMP-dependent synthetase/ligase.
       0.773
EHA61826.1
KEGG: pmt:PMT2058 putative O-succinylbenzoate synthase; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal.
       0.618
menA
1,4-dihydroxy-2-naphthoate phytyltransferase; Involved in the synthesis of phylloquinone (vitamin K1). Catalyzes the transfer of a prenyl chain to 2-carboxy-1,4- naphthoquinone; Belongs to the MenA family. Type 2 subfamily.
       0.618
EHA61828.1
TIGRFAM: Isochorismate synthase; KEGG: pmf:P9303_27351 isochorismate synthase; PFAM: Chorismate binding, C-terminal.
       0.452
EHA60436.1
KEGG: pme:NATL1_18781 hypothetical protein.
  
     0.434
EHA62296.1
KEGG: ava:Ava_0939 hypothetical protein.
  
     0.432
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.421
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
  
    0.414
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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