STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61851.1Nickel-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmf:P9303_28051 ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core. (537 aa)    
Predicted Functional Partners:
EHA60165.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmt:PMT0266 putative ABC transporter, oligopeptides.
 
 0.998
EHA60217.1
ABC-type transporter, integral membrane subunit; PFAM: Cobalt transport protein; KEGG: pmf:P9303_21501 cobalt ABC transporter permease.
  
 0.988
EHA63053.1
ABC-type transporter, integral membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: pmf:P9303_08851 putative ABC transporter, oligopeptides.
 
 0.983
EHA63054.1
ABC-type transporter, periplasmic subunit; PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: pmt:PMT1145 ABC transporter substrate-binding protein.
 
 
 0.951
EHA61760.1
KEGG: pmt:PMT1987 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
0.811
EHA63288.1
KEGG: pmt:PMT0788 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
 
0.809
EHA61852.1
Hypothetical protein.
       0.773
EHA63226.1
Phosphonate-transporting ATPase; PFAM: ABC transporter-like; KEGG: pmt:PMT0893 ABC transporter for amino acids, ATP binding component; SMART: ATPase, AAA+ type, core.
  
  
 
0.674
EHA61850.1
(p)ppGpp synthetase I, SpoT/RelA; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
       0.611
EHA61849.1
Protein of unknown function UPF0061; PFAM: Uncharacterised protein family UPF0061; KEGG: pmt:PMT2113 hypothetical protein.
       0.551
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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