Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA61860.1KEGG: rlt:Rleg2_5110 HupE/UreJ protein. (197 aa)    
Predicted Functional Partners:
EHA61859.1
KEGG: bbt:BBta_1289 hypothetical protein.
       0.773
EHA61862.1
KEGG: rlg:Rleg_6124 hypothetical protein.
       0.739
EHA61863.1
KEGG: rlg:Rleg_6123 hypothetical protein.
       0.739
EHA61861.1
KEGG: rlt:Rleg2_5109 hypothetical protein.
       0.737
EHA61858.1
KEGG: pmt:PMT1054 ribosomal L29e family protein.
       0.532
EHA61864.1
2-hydroxy-3-oxopropionate reductase; KEGG: pmf:P9303_27951 putative 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding.
       0.512
EHA64121.1
PFAM: Protein of unknown function DUF1232; KEGG: pmt:PMT0457 hypothetical protein.
  
     0.424
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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