STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61864.12-hydroxy-3-oxopropionate reductase; KEGG: pmf:P9303_27951 putative 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding. (304 aa)    
Predicted Functional Partners:
EHA62339.1
KEGG: pmf:P9303_25801 hypothetical protein.
 
  
 0.812
EHA60429.1
TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: pmt:PMT1493 putative diaminopelargonic acid synthase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.722
EHA60241.1
PFAM: Aldehyde dehydrogenase domain; KEGG: pmt:PMT0191 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 0.707
EHA64006.1
KEGG: cbu:CBU_1204 succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain.
  
 
 0.663
EHA63533.1
KEGG: pmy:Pmen_3664 glycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain.
 
  
 0.654
EHA62338.1
Protein of unknown function DUF224 cysteine-rich region domain protein; PFAM: Cysteine-rich domain; 4Fe-4S binding domain; KEGG: pmf:P9303_25781 Fe-S oxidoreductase.
 
  
  0.569
EHA60544.1
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 
 0.542
acsA
Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
    
 0.537
EHA61861.1
KEGG: rlt:Rleg2_5109 hypothetical protein.
       0.535
EHA61862.1
KEGG: rlg:Rleg_6124 hypothetical protein.
       0.535
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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