Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA61868.1PFAM: Pentapeptide repeat; KEGG: pmf:P9303_27891 hypothetical protein. (258 aa)    
Predicted Functional Partners:
EHA59395.1
PFAM: Pentapeptide repeat; KEGG: npu:Npun_F0732 pentapeptide repeat-containing protein.
  
     0.772
EHA63675.1
PFAM: Pentapeptide repeat; KEGG: pmt:PMT0626 hypothetical protein.
  
     0.770
EHA60102.1
PFAM: Pentapeptide repeat; KEGG: pmf:P9303_19861 hypothetical protein.
  
     0.762
EHA63864.1
PFAM: Pentapeptide repeat; KEGG: pmf:P9303_16951 hypothetical protein.
  
     0.755
ribBA
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family.
     
  0.666
EHA61867.1
PFAM: Aminotransferase, class I/classII; KEGG: pmf:P9303_27901 aminotransferases class-I.
       0.553
EHA61906.1
PFAM: CHASE2; KEGG: pmf:P9303_03401 hypothetical protein.
  
  
  0.522
EHA60595.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_02581 putative NADH dehydrogenase, transport associated.
      
 0.503
EHA61907.1
Hypothetical protein.
     
  0.455
EHA61908.1
Adenylate/guanylate cyclase with Chase sensor; KEGG: pmf:P9303_03401 hypothetical protein; PFAM: CHASE2; Adenylyl cyclase class-3/4/guanylyl cyclase; SMART: Adenylyl cyclase class-3/4/guanylyl cyclase.
     
  0.455
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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