Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA61869.1PFAM: Type II/III secretion system; NolW-like; KEGG: pmt:PMT2098 general (type II) secretion pathway protein D precursor; Belongs to the bacterial secretin family. (787 aa)    
Predicted Functional Partners:
EHA63639.1
FHA modulated glycosyl transferase/transpeptidase; KEGG: syf:Synpcc7942_2000 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Forkhead-associated (FHA) domain; Penicillin-binding protein, transpeptidase; SMART: Forkhead-associated (FHA) domain.
 
  
 0.794
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
  
 0.721
EHA61751.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT1979 porin; Belongs to the OprB family.
  
     0.703
EHA59079.1
S-layer domain-containing protein; PFAM: S-layer homology domain; KEGG: pmt:PMT1979 porin; Belongs to the OprB family.
  
     0.701
EHA63635.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT0998 porin; Belongs to the OprB family.
  
     0.699
EHA63613.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmt:PMT0284 porin; Belongs to the OprB family.
  
     0.694
EHA64283.1
KEGG: pmf:P9303_05981 hypothetical protein.
  
     0.665
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
  
  
 0.664
EHA61750.1
S-layer domain-containing protein; PFAM: S-layer homology domain; Carbohydrate-selective porin OprB; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.649
EHA62242.1
KEGG: pmf:P9303_24571 hypothetical protein.
  
     0.640
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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