Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA61885.1ABC-1 domain-containing protein; PFAM: ABC-1; KEGG: pmf:P9303_27711 putative kinase. (562 aa)    
Predicted Functional Partners:
EHA61886.1
KEGG: pmt:PMT2081 hypothetical protein.
       0.814
EHA61887.1
KEGG: pmf:P9303_27691 hypothetical protein.
       0.596
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
     
  0.562
fusA
Translation elongation factor G; Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. EF-G/EF-2 s [...]
     
  0.554
EHA63617.1
UbiD family decarboxylase; KEGG: pmf:P9303_18901 3-polyprenyl-4-hydroxybenzoate decarboxylase; TIGRFAM: Carboxylyase-related; PFAM: Carboxylyase-related; Belongs to the UbiD family.
   
 
 0.535
ubiX
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; Flavin prenyltransferase that catalyzes the synthesis of the prenylated FMN cofactor (prenyl-FMN) for 4-hydroxy-3-polyprenylbenzoic acid decarboxylase UbiD. The prenyltransferase is metal-independent and links a dimethylallyl moiety from dimethylallyl monophosphate (DMAP) to the flavin N5 and C6 atoms of FMN; Belongs to the UbiX/PAD1 family.
    
 0.524
EHA64336.1
KEGG: pmf:P9303_06541 ADP-heptose:LPS heptosyltransferase.
   
 
  0.508
EHA63283.1
PFAM: Methyltransferase type 12; KEGG: pmt:PMT0792 hypothetical protein.
    
  0.496
EHA63490.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_18721 hypothetical protein.
    
  0.496
EHA64418.1
PFAM: Methyltransferase type 12; KEGG: pme:NATL1_17731 hypothetical protein.
    
  0.496
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.