STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61888.1Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: pmt:PMT2126 phage integrase; Belongs to the 'phage' integrase family. (546 aa)    
Predicted Functional Partners:
EHA59406.1
KEGG: pmt:PMT1673 hypothetical protein.
   
    0.575
EHA61887.1
KEGG: pmf:P9303_27691 hypothetical protein.
       0.546
EHA63257.1
PFAM: Phosphoribosyltransferase; KEGG: pmt:PMT0810 adenine phosphoribosyltransferase.
   
    0.543
EHA62471.1
PFAM: Beta-ketoacyl synthase, N-terminal; 2-nitropropane dioxygenase, NPD; Beta-ketoacyl synthase, C-terminal; Acyl transferase; Phosphopantetheine-binding; KEGG: gvi:gll4226 modular polyketide synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, acyl transferase domain.
    
 0.494
EHA62472.1
KR domain protein; KEGG: gvi:gll4226 modular polyketide synthase; PFAM: Polyketide synthase, KR; SMART: Polyketide synthase/Fatty acid synthase, KR.
    
 0.494
EHA61889.1
Hypothetical protein.
       0.486
guaA
GMP synthase (glutamine-hydrolyzing); Catalyzes the synthesis of GMP from XMP.
     
 0.468
EHA59334.1
KEGG: pmt:PMT1724 arogenate dehydrogenase; PFAM: Prephenate dehydrogenase.
  
    0.452
EHA63979.1
PFAM: Protein of unknown function DUF159; KEGG: pmj:P9211_08091 hypothetical protein; Belongs to the SOS response-associated peptidase family.
   
    0.432
EHA61885.1
ABC-1 domain-containing protein; PFAM: ABC-1; KEGG: pmf:P9303_27711 putative kinase.
       0.432
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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