STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA61914.1KEGG: pmt:PMT1158 hypothetical protein. (114 aa)    
Predicted Functional Partners:
EHA63366.1
Hypothetical protein; KEGG: cyh:Cyan8802_0855 uncharacterized protein involved in ubiquinone biosynthesis.
  
     0.755
EHA60186.1
KEGG: pmt:PMT1019 hypothetical protein.
  
     0.732
EHA63409.1
N-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD; KEGG: pmt:PMT0712 N-acetylmuramoyl-L-alanine amidase; PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: N-acetylmuramoyl-L-alanine amidase, family 2.
  
     0.716
EHA60225.1
KEGG: pmt:PMT0199 hypothetical protein.
  
     0.703
EHA63083.1
TIGRFAM: Lycopene cyclase, beta/epsilon; KEGG: pmf:P9303_09161 putative lycopene beta cyclase; PFAM: Lycopene cyclase-type, FAD-binding.
  
 
  0.675
EHA60366.1
KEGG: pmt:PMT1440 hypothetical protein.
  
     0.674
EHA63235.1
KEGG: pmf:P9303_12241 hypothetical protein.
  
     0.673
EHA63283.1
PFAM: Methyltransferase type 12; KEGG: pmt:PMT0792 hypothetical protein.
    
  0.653
EHA63490.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_18721 hypothetical protein.
    
  0.653
EHA64418.1
PFAM: Methyltransferase type 12; KEGG: pme:NATL1_17731 hypothetical protein.
    
  0.653
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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