STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61923.1PFAM: Phosphoesterase, DHHA1; KEGG: pmt:PMT2157 alanyl-tRNA synthetase. (160 aa)    
Predicted Functional Partners:
EHA63474.1
PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: pmf:P9303_28691 hypothetical protein.
   
 0.932
EHA61925.1
PFAM: Sulfotransferase domain; KEGG: rsh:Rsph17029_4075 sulfotransferase.
   
  0.815
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
       0.810
pheT
TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: pmf:P9303_14801 phenylalanyl-tRNA synthetase subunit beta; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial.
  
 
 0.775
EHA60532.1
PFAM: Tetratricopeptide TPR-1; KEGG: amr:AM1_5932 pentapeptide repeat-containing serine/threonine kinase.
   
  0.641
EHA64211.1
TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: pmf:P9303_07511 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Belongs to the peptidase S26 family.
   
    0.629
EHA63418.1
KEGG: pmf:P9303_15161 hypothetical protein.
    
  0.625
EHA62458.1
Hypothetical protein; KEGG: tet:TTHERM_00856770 TPR Domain containing protein.
    
  0.625
EHA62522.1
PFAM: Sulfotransferase domain; KEGG: pmf:P9303_01341 hypothetical protein.
    
  0.625
EHA60135.1
KEGG: pmt:PMT0296 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat.
    
  0.625
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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