STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61943.1Pirin domain protein; PFAM: Pirin, N-terminal; KEGG: syf:Synpcc7942_1696 hypothetical protein; Belongs to the pirin family. (247 aa)    
Predicted Functional Partners:
EHA61942.1
PFAM: NADPH-dependent FMN reductase; KEGG: pmj:P9211_00461 putative reductase.
       0.800
EHA61941.1
PFAM: Rubredoxin-type Fe(Cys)4 protein; Rubrerythrin; KEGG: pmf:P9303_28841 rubredoxin:rubrerythrin:rubredoxin-type Fe(Cys)4 protein.
       0.508
EHA61939.1
KEGG: pmt:PMT2164 metallo-beta-lactamase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; Beta-lactamase-like; SMART: Flavin reductase-like, FMN-binding; Beta-lactamase-like; overlaps another CDS with the same product name.
 
     0.484
EHA61940.1
KEGG: pmf:P9303_28831 flavodoxin:flavin reductase-like domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; Flavodoxin/nitric oxide synthase; SMART: Flavin reductase-like, FMN-binding; overlaps another CDS with the same product name.
 
     0.481
EHA61944.1
KEGG: pmf:P9303_28881 hypothetical protein.
       0.432
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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