STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61968.1PFAM: SNARE associated Golgi protein; KEGG: pmt:PMT2186 hypothetical protein. (215 aa)    
Predicted Functional Partners:
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
 
  0.853
EHA64145.1
PFAM: Glycosyl transferase, family 2; KEGG: pmf:P9303_08261 cell wall biosynthesis glycosyltransferase.
  
     0.745
EHA64144.1
PFAM: Protein of unknown function DUF2064; KEGG: pmf:P9303_08281 hypothetical protein.
 
     0.728
EHA63208.1
PFAM: Radical SAM; KEGG: pmt:PMT0862 hypothetical protein.
 
   
 0.656
EHA62321.1
KEGG: pmf:P9303_25471 selenide, water dikinase; TIGRFAM: Pyridine nucleotide-disulphide oxidoreductase family protein, N-terminal; Selenide water dikinase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; AIR synthase-related protein; AIR synthase-related protein, C-terminal.
 
  
  0.587
EHA61969.1
Hypothetical protein.
       0.571
EHA61970.1
KEGG: pmf:P9303_08401 hypothetical protein.
       0.571
EHA63021.1
PFAM: Methyltransferase type 11; KEGG: pmt:PMT1171 methyltransferase.
  
  
  0.569
gcvH
Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
   
 
  0.569
gcvT
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine.
    
  0.563
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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