STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61971.1PFAM: Mechanosensitive ion channel MscS; KEGG: cyj:Cyan7822_3437 mechanosensitive ion channel protein MscS. (456 aa)    
Predicted Functional Partners:
EHA61970.1
KEGG: pmf:P9303_08401 hypothetical protein.
 
     0.534
EHA61905.1
KEGG: pmt:PMT2149 mechanosensitive ion channel; PFAM: Cyclic nucleotide-binding domain; Mechanosensitive ion channel MscS; SMART: Cyclic nucleotide-binding domain.
 
  
0.483
EHA61969.1
Hypothetical protein.
       0.439
EHA60462.1
PFAM: Protein of unknown function DUF389; KEGG: pmt:PMT1531 hypothetical protein.
  
     0.412
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.