STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA61975.1PFAM: Mechanosensitive ion channel MscS; KEGG: pmt:PMT2077 small mechanosensitive ion channel. (357 aa)    
Predicted Functional Partners:
EHA61972.1
PFAM: Protein of unknown function DUF990; KEGG: pmf:P9303_29101 membrane protein, multidrug efflux associated.
       0.536
EHA61973.1
KEGG: pmf:P9303_29111 putative multidrug efflux ABC transporter.
       0.536
EHA61974.1
KEGG: pmt:PMT2190 putative multidrug efflux ABC transporter; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.536
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.454
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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