STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62010.1PFAM: Amino acid permease domain; KEGG: pmf:P9303_10831 hypothetical protein. (531 aa)    
Predicted Functional Partners:
EHA62187.1
Sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmj:P9211_06751 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
    
 0.905
EHA60237.1
Cyclomaltodextrinase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: pmt:PMT0192 glycoside hydrolase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
    
 0.905
EHA60240.1
Maltose alpha-D-glucosyltransferase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: cyb:CYB_0677 trehalose synthase/putative maltokinase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain.
    
 0.905
EHA60371.1
KEGG: syf:Synpcc7942_1129 hypothetical protein.
    
 0.738
nadE
NAD+ synthetase; Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source.
    
 0.721
EHA62009.1
PFAM: Aminotransferase, class IV; KEGG: pmt:PMT2224 aminotransferase class-IV.
     
 0.706
EHA62008.1
Anthranilate synthase; KEGG: pmf:P9303_29681 putative p-aminobenzoate synthetase; PFAM: Chorismate binding, C-terminal.
     
 0.702
queC
exsB protein; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.693
EHA62054.1
Cl- channel voltage-gated family protein; PFAM: Chloride channel, voltage gated; KEGG: pmf:P9303_29991 putative chloride channel.
 
 
 
 0.660
aroE
Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA).
   
 0.635
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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