STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62023.1PFAM: Domain of unknown function DUF404; Domain of unknown function DUF407; KEGG: pme:NATL1_15711 hypothetical protein. (496 aa)    
Predicted Functional Partners:
EHA62024.1
PFAM: Domain of unknown function DUF403; KEGG: pmn:PMN2A_0732 hypothetical protein.
  
 0.996
EHA62025.1
KEGG: pmm:PMM1040 transglutaminase-like superfamily protein; PFAM: Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like.
 
  
 0.962
EHA59347.1
Glutamate/cysteine ligase; KEGG: pmt:PMT1712 hypothetical protein; TIGRFAM: Glutamate--cysteine ligase, putative; PFAM: Glutamate--cysteine ligase, GCS2.
    
  0.531
EHA63508.1
alpha-L-glutamate ligase, RimK family; KEGG: swd:Swoo_4122 alpha-L-glutamate ligase; TIGRFAM: S6 modification enzyme RimK; PFAM: ATP-grasp fold, RimK-type; Belongs to the RimK family.
    
  0.495
gshB
PFAM: Prokaryotic glutathione synthetase, ATP-binding; Prokaryotic glutathione synthetase, N-terminal; TIGRFAM: Glutathione synthetase, prokaryotic; HAMAP: Glutathione synthetase, prokaryotic; KEGG: pmf:P9303_27361 glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
  0.491
EHA62286.1
Glu/Leu/Phe/Val dehydrogenase dimerization region; KEGG: pmh:P9215_04071 glutamate dehydrogenase/leucine dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
   
 
  0.472
ureB
PFAM: Urease, beta subunit; TIGRFAM: Urease, beta subunit; HAMAP: Urease, beta subunit; KEGG: pmt:PMT2235 urease subunit beta; Belongs to the urease beta subunit family.
       0.424
ureC
PFAM: Amidohydrolase 1; Urease alpha-subunit, N-terminal; TIGRFAM: Urease, alpha subunit; HAMAP: Urease, alpha subunit; KEGG: pmt:PMT2236 urease subunit alpha.
       0.424
ureA
PFAM: Urease, alpha/gamma subunit; TIGRFAM: Urease, alpha/gamma subunit; HAMAP: Urease, gamma subunit; KEGG: pmf:P9303_29791 urease subunit gamma; Belongs to the urease gamma subunit family.
       0.414
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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