STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62026.1KEGG: amr:AM1_1836 hypothetical protein. (163 aa)    
Predicted Functional Partners:
EHA64393.1
KEGG: pmt:PMT1406 hypothetical protein.
  
     0.714
EHA63612.1
Regulatory protein Crp; PFAM: HTH transcriptional regulator, Crp; KEGG: pmj:P9211_09541 Crp family regulatory protein.
  
     0.665
EHA63083.1
TIGRFAM: Lycopene cyclase, beta/epsilon; KEGG: pmf:P9303_09161 putative lycopene beta cyclase; PFAM: Lycopene cyclase-type, FAD-binding.
  
     0.652
EHA62028.1
Molybdopterin-guanine dinucleotide biosynthesis protein MobA; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor; Belongs to the MobA family.
 
     0.643
EHA62963.1
KEGG: pmf:P9303_19241 hypothetical protein.
  
     0.629
EHA62027.1
Molybdenum cofactor synthesis domain protein; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
       0.586
EHA63254.1
Hypothetical protein; KEGG: syf:Synpcc7942_1997 high light-inducible protein.
  
     0.545
EHA64198.1
Integrase family protein; PFAM: Integrase, catalytic core, phage; KEGG: pmf:P9303_07651 phage integrase family.
  
     0.543
EHA59407.1
PFAM: Protein of unknown function DUF2470; KEGG: pmf:P9303_22201 hypothetical protein.
  
     0.505
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
  
     0.504
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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