STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62031.1KEGG: cyb:CYB_0042 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02664, nitrate reductase-associated; PFAM: Conserved hypothetical protein CHP02664, nitrate reductase-associated. (151 aa)    
Predicted Functional Partners:
EHA60372.1
PFAM: Ferredoxin thioredoxin reductase, alpha chain; KEGG: syn:ssr0330 ferredoxin-thioredoxin reductase, variable chain.
  
     0.756
EHA60090.1
KEGG: amr:AM1_1790 hypothetical protein.
  
     0.749
EHA64357.1
KEGG: pmf:P9303_06771 hypothetical protein.
  
     0.748
EHA63712.1
KEGG: pmt:PMT0493 hypothetical protein.
  
     0.745
EHA62203.1
PFAM: Protein of unknown function DUF2555; KEGG: pmf:P9303_23881 hypothetical protein.
  
     0.742
EHA64156.1
KEGG: syf:Synpcc7942_0308 CO2 hydration protein; TIGRFAM: CO2 hydration; PFAM: CO2 hydration.
  
     0.737
EHA62265.1
PFAM: Protein of unknown function DUF1997; KEGG: pmf:P9303_24831 hypothetical protein.
  
     0.737
EHA64409.1
KaiA family protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
  
     0.718
EHA60244.1
KEGG: pmt:PMT0188 hypothetical protein.
  
     0.712
EHA59282.1
KEGG: pmt:PMT1771 hypothetical protein.
  
     0.698
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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