Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA62048.1PFAM: Major facilitator superfamily MFS-1; KEGG: pma:Pro1861 major facilitator superfamily permease. (407 aa)    
Predicted Functional Partners:
EHA62047.1
PFAM: Glycosyl transferase, family 3, N-terminal; KEGG: pmt:PMT2242 hypothetical protein.
       0.714
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
       0.637
EHA62046.1
Hypothetical protein.
       0.618
EHA63389.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.600
EHA63828.1
TIGRFAM: ABC transporter membrane fusion protein, DevB type; KEGG: pmt:PMT0589 ABC transporter.
  
  0.575
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
   
  0.504
EHA62214.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0980 outer membrane efflux protein.
   
  0.504
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
   
  0.504
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
   
  0.489
EHA64115.1
PFAM: Secretion protein HlyD; KEGG: ftn:FTN_1276 membrane fusion protein.
   
  0.489
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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