STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA62051.1PFAM: Phosphatidate cytidylyltransferase; KEGG: pmf:P9303_29961 dolichol kinase. (203 aa)    
Predicted Functional Partners:
EHA63895.1
PFAM: CDP-alcohol phosphatidyltransferase; KEGG: pmf:P9303_17481 CDP-diacylglycerol-glycerol-3-phosphate 3-phosphatidyltransferase; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.730
EHA60435.1
Protein of unknown function DUF1257; PFAM: Uncharacterised protein family Ycf35; KEGG: pmf:P9303_04461 hypothetical protein.
  
     0.692
EHA62050.1
RNA polymerase, sigma 70 subunit, RpoD subfamily; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
       0.651
EHA60157.1
TIGRFAM: Chlorophyll synthase, ChlG; Bacteriochlorophyll/chlorophyll synthetase; KEGG: pmt:PMT0272 bacteriochlorophyll/chlorophyll a synthase; PFAM: UbiA prenyltransferase.
 
  
 0.547
EHA58634.1
PFAM: Phosphatidic acid phosphatase type 2/haloperoxidase; KEGG: pmt:PMT1569 PA-phosphatase-like phosphoesterase; SMART: Phosphatidic acid phosphatase type 2/haloperoxidase.
   
 0.546
EHA63835.1
PFAM: Protein of unknown function DUF92, TMEM19; KEGG: pmf:P9303_14261 hypothetical protein.
 
     0.517
EHA59093.1
TIGRFAM: Sucrose-phosphate synthase, glycosyltransferase domain; Sucrose phosphate synthase, sucrose phosphatase-like domain; KEGG: pmf:P9303_30171 sucrose phosphate synthase; PFAM: Sucrose-phosphate synthase; Glycosyl transferase, group 1; Sucrose synthase.
     
 0.514
EHA63890.1
KEGG: pmj:P9211_09671 hypothetical protein.
  
 
   0.509
EHA59260.1
Radical SAM domain protein; KEGG: pmf:P9303_23771 Fe-S oxidoreductase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB.
  
     0.507
EHA63183.1
KEGG: npu:Npun_F3905 hypothetical protein.
  
     0.503
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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