STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60382.130S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family. (186 aa)    
Predicted Functional Partners:
EHA64129.1
KEGG: pmf:P9303_18151 hypothetical protein.
  
     0.773
EHA64314.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: pmf:P9303_06321 hypothetical protein.
  
     0.773
EHA62356.1
KEGG: pme:NATL1_20551 hypothetical protein.
  
     0.768
EHA60383.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, hypothetical 1; KEGG: pmf:P9303_04971 putative imidazoleglycerol-phosphate dehydratase.
 
     0.768
EHA60541.1
PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: pmf:P9303_03251 hypothetical protein.
  
     0.764
ndhL
NAD(P)H-quinone oxidoreductase subunit L; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.763
EHA63286.1
KEGG: pmf:P9303_14221 hypothetical protein.
  
     0.762
EHA63354.1
KEGG: pmt:PMT0745 hypothetical protein.
  
     0.762
EHA63626.1
PFAM: Protein of unknown function DUF1350; KEGG: pmt:PMT0388 hypothetical protein.
  
     0.762
EHA59261.1
PFAM: Abortive infection protein; KEGG: pmt:PMT1793 abortive infection protein.
  
     0.760
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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