STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60407.1PFAM: Methyltransferase type 12; KEGG: pmf:P9303_04751 methyltransferase. (406 aa)    
Predicted Functional Partners:
EHA62303.1
Cobaltochelatase subunit; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
 0.947
EHA60408.1
PFAM: Phycobilisome linker domain; Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0328 phycobilisome core-membrane linker polypeptide; Belongs to the phycobilisome linker protein family.
 
     0.888
EHA59373.1
KEGG: mar:MAE_24450 phycocyanin beta subunit; TIGRFAM: Phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
   
 0.795
EHA60406.1
KEGG: pmt:PMT1473 H+-transporting ATP synthase.
       0.785
EHA63377.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: cyn:Cyan7425_1034 phycobilisome protein.
  
   
 0.775
EHA63424.1
PFAM: Phycobilisome linker domain; KEGG: pma:Pro0345 phycoerythrin class III gamma chain; Belongs to the phycobilisome linker protein family.
  
     0.772
EHA60411.1
CpcD phycobilisome linker domain protein; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
     0.772
EHA59392.1
PFAM: Phycobilisome linker domain; CpcD phycobilisome linker-like; KEGG: gvi:gvip183 phycoerythrin-associated linker protein; Belongs to the phycobilisome linker protein family.
  
     0.771
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.770
EHA59372.1
KEGG: cyt:cce_2652 phycocyanin alpha subunit; TIGRFAM: Phycocyanin, alpha subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
     0.770
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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