Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA60423.1DSH domain protein; KEGG: pmt:PMT1487 putative DNA helicase; PFAM: DSH, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal. (911 aa)    
Predicted Functional Partners:
EHA60424.1
KEGG: pmf:P9303_04591 putative 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII.
       0.642
EHA60425.1
KEGG: pmf:P9303_04581 hypothetical protein.
       0.636
EHA60426.1
PFAM: Methyltransferase type 12; KEGG: pmf:P9303_04571 methylase.
       0.636
bioD
Dethiobiotin synthetase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
       0.636
EHA61924.1
KEGG: gpb:HDN1F_01080 hypothetical protein.
    
  0.628
EHA60650.1
KEGG: pmt:PMT1970 hypothetical protein.
  
  
  0.497
EHA60429.1
TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; KEGG: pmt:PMT1493 putative diaminopelargonic acid synthase; PFAM: Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.481
EHA60644.1
PFAM: Glycosyl transferase, family 2; Tetratricopeptide TPR-1; KEGG: pmf:P9303_26171 TPR repeat-containing glycosyl transferase.
    
  0.444
EHA63113.1
KEGG: pmf:P9303_09381 putative cobyrinic acid a,c-diamide synthase; TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase.
   
    0.405
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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