STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60436.1KEGG: pme:NATL1_18781 hypothetical protein. (67 aa)    
Predicted Functional Partners:
EHA60433.1
PFAM: NADP-dependent oxidoreductase domain; KEGG: pmf:P9303_04491 aldo/keto reductase family protein.
 
     0.803
EHA60434.1
KEGG: pmf:P9303_04481 3Fe-4S ferredoxin.
       0.773
EHA60435.1
Protein of unknown function DUF1257; PFAM: Uncharacterised protein family Ycf35; KEGG: pmf:P9303_04461 hypothetical protein.
       0.773
EHA62258.1
KEGG: pmt:PMT1848 hypothetical protein.
  
     0.767
EHA63329.1
KEGG: pmt:PMT0769 hypothetical protein.
  
     0.746
EHA62296.1
KEGG: ava:Ava_0939 hypothetical protein.
  
     0.691
EHA59098.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT2273 hypothetical protein.
  
     0.689
EHA62223.1
PFAM: Fatty acid desaturase, type 1; KEGG: pmt:PMT1816 beta carotene hydroxylase.
  
     0.674
EHA60437.1
PFAM: PBS lyase HEAT-like repeat; HEAT; KEGG: pmt:PMT1501 hypothetical protein.
 
     0.662
EHA60440.1
PFAM: Chlorophyll A-B binding protein; KEGG: pme:NATL1_18831 putative high light inducible protein.
 
     0.652
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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