STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60469.1HAMAP: Aspartoacylase; KEGG: pmf:P9303_04021 aspartoacylase; PFAM: Succinylglutamate desuccinylase/aspartoacylase; Belongs to the AspA/AstE family. Aspartoacylase subfamily. (312 aa)    
Predicted Functional Partners:
EHA59172.1
KEGG: pmt:PMT0073 aspartate kinase; TIGRFAM: Aspartate kinase domain; Aspartate kinase, monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT.
    
  0.866
EHA63648.1
KEGG: oan:Oant_2440 UreA transporter; PFAM: Urea transporter; EF-hand; SMART: Calcium-binding EF-hand.
  
     0.752
EHA62335.1
KEGG: pmt:PMT1685 heme oxygenase; PFAM: Heme oxygenase-like.
  
     0.687
EHA62421.1
KEGG: pmc:P9515_13871 hypothetical protein; PFAM: Dual specificity phosphatase, catalytic domain; SMART: Dual specificity phosphatase, subgroup, catalytic domain.
  
     0.631
EHA62458.1
Hypothetical protein; KEGG: tet:TTHERM_00856770 TPR Domain containing protein.
  
     0.625
EHA60470.1
PFAM: Glutathione S-transferase, C-terminal; KEGG: pmf:P9303_04011 glutathione S-transferase C terminus protein.
       0.611
EHA64006.1
KEGG: cbu:CBU_1204 succinate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain.
  
 
 0.608
EHA60241.1
PFAM: Aldehyde dehydrogenase domain; KEGG: pmt:PMT0191 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
 
 0.608
EHA60471.1
PFAM: Protein of unknown function DUF2301, transmembrane; KEGG: pmf:P9303_04001 hypothetical protein.
       0.583
EHA60472.1
KEGG: pmt:PMT1540 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.559
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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