STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60471.1PFAM: Protein of unknown function DUF2301, transmembrane; KEGG: pmf:P9303_04001 hypothetical protein. (220 aa)    
Predicted Functional Partners:
EHA60470.1
PFAM: Glutathione S-transferase, C-terminal; KEGG: pmf:P9303_04011 glutathione S-transferase C terminus protein.
       0.813
EHA60472.1
KEGG: pmt:PMT1540 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core.
       0.774
thf1
Protein thf1; May be involved in photosynthetic membrane biogenesis.
  
     0.753
EHA63352.1
KEGG: pmf:P9303_14701 beta-propeller domain-containing protein.
  
     0.743
EHA59082.1
KEGG: pmt:PMT2258 hypothetical protein.
  
     0.732
EHA64346.1
KEGG: pme:NATL1_05181 hypothetical protein.
  
     0.722
EHA64248.1
KEGG: syf:Synpcc7942_0084 hypothetical protein.
  
     0.695
pcxA
Envelope membrane protein; Involved in light-induced Na(+)-dependent proton extrusion. Also seems to be involved in CO(2) transport; Belongs to the CemA family.
  
     0.678
EHA62201.1
PFAM: Photosystem II PsbO, manganese-stabilising; KEGG: syf:Synpcc7942_0294 photosystem II manganese-stabilizing polypeptide.
  
     0.665
EHA64177.1
PFAM: Protein of unknown function DUF1817; KEGG: amr:AM1_6353 hypothetical protein.
  
     0.656
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.