STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60480.1KEGG: pmf:P9303_03861 hypothetical protein. (122 aa)    
Predicted Functional Partners:
EHA60481.1
PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: pma:Pro0242 putative sulfate transporter.
       0.773
EHA64365.1
KEGG: pmt:PMT1301 hypothetical protein.
  
     0.626
EHA60479.1
KEGG: pmf:P9303_03871 DnaJ3 protein; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal.
       0.539
EHA63464.1
KEGG: pmf:P9303_15591 hypothetical protein.
  
     0.510
EHA60545.1
Protein of unknown function YGGT; PFAM: Uncharacterised protein family Ycf19; KEGG: pmf:P9303_03211 hypothetical protein.
  
     0.508
EHA60482.1
Hypothetical protein.
       0.507
EHA64351.1
PFAM: Photosystem I PsaF, reaction centre subunit III; KEGG: syf:Synpcc7942_1250 photosystem I reaction center subunit III precursor.
  
     0.488
EHA64295.1
KEGG: pmf:P9303_06101 hypothetical protein.
  
     0.485
psb28
TIGRFAM: Photosystem II Psb28, class 1; HAMAP: Photosystem II Psb28, class 1; KEGG: pmf:P9303_16381 photosystem II reaction center protein Psb28; PFAM: Photosystem II Psb28, class 1; Belongs to the Psb28 family.
  
     0.481
EHA59082.1
KEGG: pmt:PMT2258 hypothetical protein.
  
     0.475
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.