STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60489.1KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease. (87 aa)    
Predicted Functional Partners:
EHA63346.1
Peroxiredoxin; KEGG: pmf:P9303_14621 thioredoxin peroxidase; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal.
   
 0.978
hflX
GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
   
 0.978
EHA60490.1
Hypothetical protein.
       0.645
EHA64110.1
KEGG: syf:Synpcc7942_0716 hypothetical protein.
  
     0.622
EHA63499.1
KEGG: mar:MAE_40890 hypothetical protein.
  
     0.608
EHA59356.1
Transcriptional regulator PadR family protein; PFAM: Transcription regulator PadR N-terminal-like; KEGG: tel:tlr1955 period-extender gene product.
  
     0.569
EHA63716.1
Hypothetical protein; KEGG: syf:Synpcc7942_0136 phage integrase.
  
     0.565
EHA62275.1
KEGG: syf:Synpcc7942_1650 phosphorylase kinase alpha subunit.
  
     0.562
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
  
 
 
 0.555
EHA64274.1
KEGG: cyn:Cyan7425_3822 hypothetical protein.
  
     0.521
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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