EHA60517.1 protein (Synechococcus sp. WH 8016)

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Score

EHA60517.1

SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein. (1633 aa)

Predicted Functional Partners:

rpoZ

0.906

rpoB

0.901

rpoA

0.892

gcvP

0.886

rpoC2

0.851

rpoC1

0.851

uvrB

0.839

dnaG

0.821

EHA60243.1

0.804

uvrA

0.804

Your Current Organism:

Synechococcus sp. WH 8016

NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHA60243.1	EHA60517.1	Syn8016DRAFT_2625	Syn8016DRAFT_2304	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	0.804
EHA60243.1	dnaG	Syn8016DRAFT_2625	Syn8016DRAFT_0730	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.940
EHA60243.1	rpoA	Syn8016DRAFT_2625	Syn8016DRAFT_2673	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.594
EHA60243.1	rpoB	Syn8016DRAFT_2625	Syn8016DRAFT_2230	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.520
EHA60243.1	rpoZ	Syn8016DRAFT_2625	Syn8016DRAFT_2155	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.680
EHA60517.1	EHA60243.1	Syn8016DRAFT_2304	Syn8016DRAFT_2625	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	0.804
EHA60517.1	dnaG	Syn8016DRAFT_2304	Syn8016DRAFT_0730	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	0.821
EHA60517.1	gcvP	Syn8016DRAFT_2304	Syn8016DRAFT_2018	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	0.886
EHA60517.1	rpoA	Syn8016DRAFT_2304	Syn8016DRAFT_2673	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.892
EHA60517.1	rpoB	Syn8016DRAFT_2304	Syn8016DRAFT_2230	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.901
EHA60517.1	rpoC1	Syn8016DRAFT_2304	Syn8016DRAFT_2229	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA-directed RNA polymerase subunit gamma; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.851
EHA60517.1	rpoC2	Syn8016DRAFT_2304	Syn8016DRAFT_2228	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the RNA polymerase beta' chain family. RpoC2 subfamily.	0.851
EHA60517.1	rpoZ	Syn8016DRAFT_2304	Syn8016DRAFT_2155	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.906
EHA60517.1	uvrA	Syn8016DRAFT_2304	Syn8016DRAFT_2818	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate.	0.804
EHA60517.1	uvrB	Syn8016DRAFT_2304	Syn8016DRAFT_2894	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	UvrABC system protein B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate and [...]	0.839
dnaG	EHA60243.1	Syn8016DRAFT_0730	Syn8016DRAFT_2625	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: pmf:P9303_21731 superfamily II DNA helicase; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal.	0.940
dnaG	EHA60517.1	Syn8016DRAFT_0730	Syn8016DRAFT_2304	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	0.821
dnaG	rpoA	Syn8016DRAFT_0730	Syn8016DRAFT_2673	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.453
dnaG	rpoB	Syn8016DRAFT_0730	Syn8016DRAFT_2230	DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.651
gcvP	EHA60517.1	Syn8016DRAFT_2018	Syn8016DRAFT_2304	Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.	SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.	0.886