STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60527.1TIGRFAM: RecB family nuclease, TM0106, putative; KEGG: pmh:P9215_04481 RecB family nuclease. (1157 aa)    
Predicted Functional Partners:
EHA64348.1
PFAM: Fibronectin-binding A, N-terminal; Domain of unknown function DUF814; KEGG: pmt:PMT1319 secreted protein MPB70 precursor.
  
    0.645
EHA62281.1
TIGRFAM: RecB family nuclease, TM0106, putative; KEGG: pmf:P9303_24981 RecB family nuclease.
  
     0.572
EHA60526.1
KEGG: dol:Dole_2268 hypothetical protein.
       0.528
EHA64427.1
Hypothetical protein; KEGG: rpc:RPC_4294 acyltransferase 3.
   
    0.461
EHA60517.1
SMART: RAP domain; KEGG: cyn:Cyan7425_3149 hypothetical protein.
 
     0.458
EHA63492.1
KEGG: pmf:P9303_18741 chalcone synthase (CHS); PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal.
  
     0.436
EHA60528.1
Hypothetical protein.
       0.423
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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