STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60541.1PRC-barrel domain protein; PFAM: PRC-barrel; KEGG: pmf:P9303_03251 hypothetical protein. (364 aa)    
Predicted Functional Partners:
EHA64314.1
PFAM: Protein of unknown function DUF2232, membrane; KEGG: pmf:P9303_06321 hypothetical protein.
  
     0.774
EHA64129.1
KEGG: pmf:P9303_18151 hypothetical protein.
  
     0.772
EHA63241.1
KEGG: pmf:P9303_13831 hypothetical protein.
  
     0.770
EHA64047.1
PFAM: Protein of unknown function DUF2518; KEGG: pmf:P9303_18421 hypothetical protein.
  
     0.770
EHA63354.1
KEGG: pmt:PMT0745 hypothetical protein.
  
     0.769
secE
Preprotein translocase, SecE subunit; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.769
EHA60360.1
KEGG: pmf:P9303_05231 hypothetical protein.
  
     0.768
EHA59332.1
KEGG: pmf:P9303_22961 hypothetical protein.
  
     0.767
EHA60382.1
30S ribosomal protein 3; Probably a ribosomal protein or a ribosome-associated protein; Belongs to the chloroplast-specific ribosomal protein cS23 family.
  
     0.764
EHA62227.1
KEGG: pmt:PMT1818 hypothetical protein.
  
     0.763
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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