Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EHA60548.1KEGG: pmt:PMT1592 hypothetical protein. (175 aa)    
Predicted Functional Partners:
EHA60549.1
KEGG: pmf:P9303_03171 hypothetical protein.
 
     0.879
EHA60547.1
PFAM: Uncharacterised protein family Ycf66; KEGG: pmt:PMT1591 hypothetical protein.
 
     0.872
EHA59278.1
KEGG: pmt:PMT1777 ferredoxin-dependent glutamate synthase; PFAM: Glutamate synthase, central-C; Glutamine amidotransferase, class-II; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal.
     
  0.852
EHA63072.1
KEGG: pmf:P9303_08961 hypothetical protein.
 
 
 0.767
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.756
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.753
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.752
EHA60557.1
KEGG: ava:Ava_0829 hypothetical protein.
  
     0.748
EHA61755.1
KEGG: pmf:P9303_26291 4-amino-4-deoxy-L-arabinose transferase.
  
     0.736
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
  
     0.731
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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