STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60549.1KEGG: pmf:P9303_03171 hypothetical protein. (116 aa)    
Predicted Functional Partners:
EHA60548.1
KEGG: pmt:PMT1592 hypothetical protein.
 
     0.879
EHA62523.1
KEGG: pmt:PMT0078 hypothetical protein.
  
     0.746
EHA63135.1
KEGG: pmt:PMT1064 hypothetical protein.
  
     0.735
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
  
     0.733
EHA64392.1
KEGG: syn:sll1386 hypothetical protein.
  
     0.728
EHA61800.1
KEGG: pmf:P9303_26941 hypothetical protein.
  
     0.727
EHA60547.1
PFAM: Uncharacterised protein family Ycf66; KEGG: pmt:PMT1591 hypothetical protein.
 
     0.727
EHA64118.1
Peptidase M10A and M12B matrixin and adamalysin; KEGG: pmt:PMT0454 hypothetical protein; PFAM: Peptidase M10, metallopeptidase; SMART: Peptidase, metallopeptidase.
  
     0.718
EHA61970.1
KEGG: pmf:P9303_08401 hypothetical protein.
  
     0.718
EHA63526.1
KEGG: cyt:cce_0005 hypothetical protein.
  
     0.713
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.