STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcSProtein of unknown function CpeS/Ycf58; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (203 aa)    
Predicted Functional Partners:
EHA59372.1
KEGG: cyt:cce_2652 phycocyanin alpha subunit; TIGRFAM: Phycocyanin, alpha subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
  
 0.930
EHA59373.1
KEGG: mar:MAE_24450 phycocyanin beta subunit; TIGRFAM: Phycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
  
 0.930
cpcT
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.927
EHA60571.1
PFAM: Phycobilisome linker domain; KEGG: syf:Synpcc7942_2030 phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
 
   
 0.925
EHA59370.1
PFAM: PBS lyase HEAT-like repeat; KEGG: syf:Synpcc7942_1054 heat repeat-containing PBS lyase; overlaps another CDS with the same product name.
  
  
 0.905
EHA60409.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_0327 allophycocyanin alpha chain.
  
   
 0.904
cpcT-2
Protein of unknown function DUF1001; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
  
 0.904
EHA60410.1
KEGG: naz:Aazo_2433 allophycocyanin subunit beta; TIGRFAM: Allophycocyanin, beta subunit; PFAM: Phycobilisome, alpha/beta subunit.
  
  
 0.868
EHA59369.1
PFAM: PBS lyase HEAT-like repeat; KEGG: ter:Tery_5046 heat domain-containing protein; overlaps another CDS with the same product name.
  
  
 0.863
EHA63644.1
Phycocyanin; PFAM: Phycobilisome, alpha/beta subunit; KEGG: syf:Synpcc7942_2158 allophycocyanin, beta subunit.
  
  
 0.862
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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