STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60572.1KEGG: pmf:P9303_02991 hypothetical protein; PFAM: Rho termination factor, N-terminal; SMART: Rho termination factor, N-terminal. (377 aa)    
Predicted Functional Partners:
EHA60573.1
KEGG: pma:Pro0089 hypothetical protein.
       0.768
EHA59355.1
KEGG: pmf:P9303_22651 hypothetical protein.
  
     0.736
EHA64321.1
KEGG: pmt:PMT1344 hypothetical protein.
  
     0.731
EHA61865.1
KEGG: pmf:P9303_27921 hypothetical protein.
  
     0.730
ndhO
NAD(P)H-quinone oxidoreductase subunit O; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.703
EHA60574.1
KEGG: pmf:P9303_02971 hypothetical protein; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase.
 
     0.682
EHA63052.1
PFAM: Domain of unknown function DUF1400; KEGG: pmt:PMT1147 putative dienelactone hydrolase.
  
     0.678
EHA63949.1
KEGG: pmj:P9211_05761 hypothetical protein.
  
     0.672
EHA60367.1
PFAM: Protein of unknown function DUF1818; KEGG: pmt:PMT1441 hypothetical protein.
  
     0.665
EHA64026.1
KEGG: pmf:P9303_18671 hypothetical protein.
  
     0.660
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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