STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60586.1KEGG: pmf:P9303_02671 RND family multidrug efflux transporter; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1137 aa)    
Predicted Functional Partners:
EHA60587.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_02661 membrane-fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.991
EHA62498.1
Efflux transporter, RND family, MFP subunit; KEGG: pmt:PMT0130 hypothetical protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
 0.958
EHA63044.1
Efflux transporter, RND family, MFP subunit; KEGG: pmf:P9303_08701 membrane fusion protein; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.931
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
  
 
 0.895
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
 
 0.882
EHA62214.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0980 outer membrane efflux protein.
  
 
 0.851
EHA63526.1
KEGG: cyt:cce_0005 hypothetical protein.
   
 0.840
EHA60585.1
KEGG: pmt:PMT1615 hypothetical protein.
       0.773
EHA64115.1
PFAM: Secretion protein HlyD; KEGG: ftn:FTN_1276 membrane fusion protein.
  
  
 0.659
EHA60588.1
AAA ATPase central domain protein; KEGG: pmf:P9303_02651 recombination factor protein RarA/unknown domain fusion protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core.
       0.543
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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