STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60592.1PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: pmt:PMT1622 putative bacterioferritin comigratory (BCP) protein. (155 aa)    
Predicted Functional Partners:
EHA63079.1
Thioredoxin; KEGG: pmj:P9211_11291 thiol-disulfide isomerase and thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
    
 
 0.654
EHA64305.1
Thioredoxin; KEGG: syf:Synpcc7942_1793 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain; Belongs to the thioredoxin family.
    
 
 0.654
EHA63389.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
    
  0.615
EHA60591.1
PFAM: 4'-phosphopantetheinyl transferase; KEGG: pmt:PMT1621 putative 4'-phosphopantetheinyl transferase family protein; Belongs to the P-Pant transferase superfamily.
       0.554
trpC
KEGG: pmf:P9303_19771 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
  
 
  0.510
EHA63025.1
TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.
     
 0.494
EHA61939.1
KEGG: pmt:PMT2164 metallo-beta-lactamase domain-containing protein; PFAM: Flavin reductase-like, FMN-binding; Beta-lactamase-like; SMART: Flavin reductase-like, FMN-binding; Beta-lactamase-like; overlaps another CDS with the same product name.
     
 0.476
EHA60590.1
KEGG: pmt:PMT1620 thymidylate synthase.
       0.458
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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