hflX protein (Synechococcus sp. WH 8016) - STRING interaction network

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hflX

GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. (566 aa)

Predicted Functional Partners:

EHA63025.1

0.986

rplC

0.924

rplK

0.911

rpmE

0.907

rplU

0.904

EHA60489.1

0.902

rplM

0.899

rpmB

0.893

rplI

0.890

rpsB

0.889

Your Current Organism:

Synechococcus sp. WH 8016

NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
EHA60489.1	EHA63025.1	Syn8016DRAFT_2276	Syn8016DRAFT_0066	KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.	TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.	0.499
EHA60489.1	hflX	Syn8016DRAFT_2276	Syn8016DRAFT_2383	KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	0.902
EHA63025.1	EHA60489.1	Syn8016DRAFT_0066	Syn8016DRAFT_2276	TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.	KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.	0.499
EHA63025.1	hflX	Syn8016DRAFT_0066	Syn8016DRAFT_2383	TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	0.986
hflX	EHA60489.1	Syn8016DRAFT_2383	Syn8016DRAFT_2276	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	KEGG: cyc:PCC7424_0989 ParB domain protein nuclease; PFAM: ParB-like nuclease; SMART: ParB-like nuclease.	0.902
hflX	EHA63025.1	Syn8016DRAFT_2383	Syn8016DRAFT_0066	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	TIGRFAM: Thioredoxin reductase; KEGG: pma:Pro1245 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Thioredoxin domain.	0.986
hflX	rplC	Syn8016DRAFT_2383	Syn8016DRAFT_2695	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	0.924
hflX	rplI	Syn8016DRAFT_2383	Syn8016DRAFT_2024	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.890
hflX	rplK	Syn8016DRAFT_2383	Syn8016DRAFT_1951	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.911
hflX	rplM	Syn8016DRAFT_2383	Syn8016DRAFT_2669	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.899
hflX	rplU	Syn8016DRAFT_2383	Syn8016DRAFT_1454	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.904
hflX	rpmB	Syn8016DRAFT_2383	Syn8016DRAFT_0472	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	Ribosomal protein L28; KEGG: pmf:P9303_15261 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.893
hflX	rpmE	Syn8016DRAFT_2383	Syn8016DRAFT_2667	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	50S ribosomal protein L31; Binds the 23S rRNA; Belongs to the bacterial ribosomal protein bL31 family. Type A subfamily.	0.907
hflX	rpsB	Syn8016DRAFT_2383	Syn8016DRAFT_0331	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	KEGG: pmt:PMT0584 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.889
rplC	hflX	Syn8016DRAFT_2695	Syn8016DRAFT_2383	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.	0.924
rplC	rplI	Syn8016DRAFT_2695	Syn8016DRAFT_2024	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L9; Binds to the 23S rRNA.	0.992
rplC	rplK	Syn8016DRAFT_2695	Syn8016DRAFT_1951	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.996
rplC	rplM	Syn8016DRAFT_2695	Syn8016DRAFT_2669	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.998
rplC	rplU	Syn8016DRAFT_2695	Syn8016DRAFT_1454	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplC	rpmB	Syn8016DRAFT_2695	Syn8016DRAFT_0472	50S ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit; Belongs to the universal ribosomal protein uL3 family.	Ribosomal protein L28; KEGG: pmf:P9303_15261 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.	0.987