STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60598.1H(+)-transporting two-sector ATPase; KEGG: pmf:P9303_02551 putative sodium transporter, trk family; PFAM: Cation transporter. (467 aa)    
Predicted Functional Partners:
EHA60599.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; KEGG: pmf:P9303_02541 putative potassium channel, VIC family.
 
 0.996
EHA64335.1
TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Ion transport 2; Regulator of K+ conductance, C-terminal; KEGG: pmt:PMT1332 VIC family potassium channel protein.
 
 0.939
EHA62355.1
PFAM: Ion transport; KEGG: rmr:Rmar_0040 ion transport protein.
  
 0.925
EHA59361.1
PFAM: Ion transport; KEGG: pmt:PMT0217 VIC family potassium channel protein.
  
 0.925
EHA60597.1
Hypothetical protein.
       0.773
hflX
GTP-binding proten HflX; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis.
       0.752
EHA60212.1
PFAM: Glycosyl transferase, group 1; KEGG: pmf:P9303_21451 putative glycosyl transferase, group 1.
    
 0.741
atpE
ATP synthase F0, C subunit; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
    
 0.740
EHA60595.1
PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: pmf:P9303_02581 putative NADH dehydrogenase, transport associated.
     
 0.730
EHA60593.1
Putative transcriptional acitvator, Baf family; KEGG: pmt:PMT1623 hypothetical protein; TIGRFAM: Type III pantothenate kinase; PFAM: Type III pantothenate kinase.
       0.534
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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