STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60616.1KEGG: pmt:PMT1643 hypothetical protein. (118 aa)    
Predicted Functional Partners:
EHA60613.1
KEGG: pmf:P9303_02391 hypothetical protein.
       0.773
xseA
Exodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family.
       0.773
EHA60615.1
Exonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family.
       0.773
EHA63991.1
KEGG: pme:NATL1_11941 hypothetical protein.
  
     0.627
EHA64296.1
Ribonuclease P; RNaseP catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'-terminus. It can also cleave other RNA substrates such as 4.5S RNA. The protein component plays an auxiliary but essential role in vivo by binding to the 5'-leader sequence and broadening the substrate specificity of the ribozyme.
  
     0.603
EHA58604.1
TIGRFAM: Conserved hypothetical protein CHP03792; KEGG: pmf:P9303_19451 hypothetical protein.
  
     0.539
EHA63888.1
KEGG: pmf:P9303_17401 hypothetical protein.
  
     0.523
EHA60612.1
KEGG: pmh:P9215_01091 high light inducible protein.
       0.510
EHA63353.1
KEGG: pmf:P9303_14711 hypothetical protein.
  
     0.455
EHA64134.1
PFAM: Protein of unknown function DUF2231, transmembrane; KEGG: pmh:P9215_16611 hypothetical protein; overlaps another CDS with the same product name.
  
     0.454
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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