Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EHA60628.1PFAM: Major facilitator superfamily MFS-1; KEGG: pmf:P9303_02151 major facilitator superfamily multidrug-efflux transporter. (372 aa)    
Predicted Functional Partners:
EHA63150.1
TIGRFAM: NHPM bacteriocin system secretion protein, HylD; KEGG: ana:all2022 hypothetical protein.
  
  0.645
EHA63152.1
PFAM: Outer membrane efflux protein; KEGG: syf:Synpcc7942_1761 hypothetical protein.
  
  0.627
EHA63389.1
Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate.
     
  0.600
EHA60620.1
PFAM: Outer membrane efflux protein; KEGG: pmt:PMT0182 RND family outer membrane efflux protein.
  
  0.579
EHA63380.1
KEGG: pmf:P9303_14831 hypothetical protein.
  
     0.571
EHA62525.1
PFAM: Secretion protein HlyD; KEGG: pmf:P9303_00851 transporter component.
  
  0.562
EHA62215.1
KEGG: pmt:PMT0979 hypothetical protein.
  
  0.548
rimO
Ribosomal protein S12 methylthiotransferase rimO; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12; Belongs to the methylthiotransferase family. RimO subfamily.
       0.539
EHA62061.1
Porin; KEGG: pmf:P9303_26321 porin; Belongs to the OprB family.
  
     0.508
EHA63691.1
KEGG: syc:syc1602_d hypothetical protein.
  
     0.507
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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