STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60637.1KEGG: pmj:P9211_01241 hypothetical protein. (86 aa)    
Predicted Functional Partners:
EHA60360.1
KEGG: pmf:P9303_05231 hypothetical protein.
  
     0.746
EHA60383.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, hypothetical 1; KEGG: pmf:P9303_04971 putative imidazoleglycerol-phosphate dehydratase.
  
     0.725
EHA60372.1
PFAM: Ferredoxin thioredoxin reductase, alpha chain; KEGG: syn:ssr0330 ferredoxin-thioredoxin reductase, variable chain.
  
     0.703
EHA63353.1
KEGG: pmf:P9303_14711 hypothetical protein.
  
     0.698
EHA64297.1
KEGG: pmt:PMT1367 hypothetical protein.
  
     0.698
EHA62227.1
KEGG: pmt:PMT1818 hypothetical protein.
  
     0.695
EHA63186.1
KEGG: pmf:P9303_09501 hypothetical protein.
  
     0.689
EHA63705.1
PFAM: Protein of unknown function DUF1816; KEGG: pmt:PMT0649 hypothetical protein.
  
     0.688
EHA63243.1
KEGG: pmt:PMT0821 hypothetical protein.
  
     0.686
EHA62269.1
KEGG: pmt:PMT1859 hypothetical protein.
  
     0.686
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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