STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60641.1Protein of unknown function DUF751; PFAM: Uncharacterised protein family Ycf33; KEGG: pmf:P9303_26141 hypothetical protein. (69 aa)    
Predicted Functional Partners:
rbfA
Ribosome-binding factor A; One of several proteins that assist in the late maturation steps of the functional core of the 30S ribosomal subunit. Associates with free 30S ribosomal subunits (but not with 30S subunits that are part of 70S ribosomes or polysomes). Required for efficient processing of 16S rRNA. May interact with the 5'-terminal helix region of 16S rRNA.
       0.803
EHA60643.1
PFAM: Glycoside hydrolase, family 3, N-terminal; KEGG: pmf:P9303_26161 beta-N-acetylglucosaminidase.
       0.803
EHA61875.1
KEGG: pmf:P9303_27821 hypothetical protein.
  
     0.760
EHA60556.1
KEGG: pmf:P9303_03111 hypothetical protein.
  
     0.760
EHA64409.1
KaiA family protein; Component of the kaiABC clock protein complex, which constitutes the main circadian regulator in cyanobacteria. The kaiABC complex may act as a promoter-nonspecific transcription regulator that represses transcription, possibly by acting on the state of chromosome compaction. In the complex, it enhances the phosphorylation status of kaiC. In contrast, the presence of kaiB in the complex decreases the phosphorylation status of kaiC, suggesting that kaiB acts by antagonizing the interaction between kaiA and kaiC. A kaiA dimer is sufficient to enhance kaiC hexamer pho [...]
  
     0.743
psaK-2
TIGRFAM: Photosystem I PsaK, reaction centre; HAMAP: Photosystem I PsaK, reaction centre; KEGG: pmb:A9601_09551 photosystem I PsaK protein (subunit X); PFAM: Photosystem I PsaG/PsaK protein.
  
     0.730
EHA60110.1
KEGG: pmm:PMM1307 hypothetical protein.
  
     0.723
EHA63975.1
KEGG: mar:MAE_18920 hypothetical protein.
  
     0.714
psaK
TIGRFAM: Photosystem I PsaK, reaction centre; HAMAP: Photosystem I PsaK, reaction centre; KEGG: cyt:cce_0400 photosystem I reaction center subunit X; PFAM: Photosystem I PsaG/PsaK protein.
  
     0.702
EHA63575.1
KEGG: cyj:Cyan7822_1390 hypothetical protein.
  
     0.695
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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