STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EHA60649.1Iron-sulfur cluster assembly accessory protein; KEGG: pmf:P9303_26221 hypothetical protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis; Belongs to the HesB/IscA family. (130 aa)    
Predicted Functional Partners:
EHA63187.1
KEGG: pme:NATL1_14711 glutaredoxin-like protein; TIGRFAM: Monothiol glutaredoxin-related; PFAM: Glutaredoxin; Belongs to the glutaredoxin family. Monothiol subfamily.
 
 0.790
EHA60650.1
KEGG: pmt:PMT1970 hypothetical protein.
       0.680
EHA60651.1
TIGRFAM: Conserved hypothetical protein CHP03492; KEGG: pmf:P9303_26251 hypothetical protein.
       0.656
EHA60652.1
KEGG: pmt:PMT1972 hypothetical protein.
       0.656
EHA60183.1
Nitrogen-fixing NifU domain-containing protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: pmf:P9303_20981 NifU-like protein.
  
 
 0.655
EHA61816.1
Cysteine desulfurase; KEGG: pmf:P9303_27201 NifS-like aminotransferase class-V; PFAM: Aminotransferase, class V/Cysteine desulfurase.
 
 
 0.639
EHA62280.1
Folate-binding protein YgfZ; KEGG: pmf:P9303_24971 aminomethyltransferase GcvT-like protein; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal.
  
 
 
 0.616
EHA63403.1
Cysteine desulfurase; KEGG: pmt:PMT0717 class-V aminotransferase family cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase.
 
 
 0.614
EHA60647.1
Cyclase/dehydrase; PFAM: Streptomyces cyclase/dehydrase; KEGG: pmf:P9303_26201 putative integral membrane protein.
       0.594
EHA60648.1
Carotene 7,8-desaturase; Catalyzes the conversion of zeta-carotene to lycopene via the intermediary of neurosporene. It carries out two consecutive desaturations (introduction of double bonds) at positions C-7 and C-7'.
       0.594
Your Current Organism:
Synechococcus sp. WH 8016
NCBI taxonomy Id: 166318
Other names: S. sp. WH 8016, Synechococcus sp. WH8016
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